Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 IRX1P1-201ENST00000438849 1838 ntBASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 KRT8P8-201ENST00000434750 1448 ntBASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 AC080038.1-201ENST00000611274 1154 ntBASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 AC092437.1-201ENST00000624794 1048 ntBASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CPPED1Q9BRF8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 WIZP1-201ENST00000531444 2299 ntBASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 YBX1P10-201ENST00000444752 975 ntBASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 MIR5787-201ENST00000611784 55 ntBASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 Z98044.1-201ENST00000632503 1764 ntBASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPPED1Q9BRF8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 MIR663A-201ENST00000385250 93 ntBASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 DUSP5P2-201ENST00000426873 1033 ntBASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 CDCA4P2-201ENST00000441182 718 ntBASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CPPED1Q9BRF8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms