Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.85■□□□□ 0.61
EBF4Q9BQW3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EBF4Q9BQW3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.84■□□□□ 0.61
EBF4Q9BQW3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 CNN2P6-201ENST00000439038 900 ntBASIC18.84■□□□□ 0.61
EBF4Q9BQW3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 C2orf69P4-201ENST00000565394 541 ntBASIC18.84■□□□□ 0.61
EBF4Q9BQW3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 SDHAP1-207ENST00000440850 2000 ntBASIC18.84■□□□□ 0.61
EBF4Q9BQW3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
EBF4Q9BQW3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.83■□□□□ 0.61
EBF4Q9BQW3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EBF4Q9BQW3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.83■□□□□ 0.61
EBF4Q9BQW3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EBF4Q9BQW3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EBF4Q9BQW3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EBF4Q9BQW3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EBF4Q9BQW3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.83■□□□□ 0.61
EBF4Q9BQW3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EBF4Q9BQW3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EBF4Q9BQW3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 AC068880.1-201ENST00000507289 2297 ntBASIC18.82■□□□□ 0.6
EBF4Q9BQW3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EBF4Q9BQW3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms