Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.79■□□□□ 0.92
YME1L1Q96TA2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YME1L1Q96TA2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
YME1L1Q96TA2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
YME1L1Q96TA2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.79■□□□□ 0.92
YME1L1Q96TA2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.79■□□□□ 0.92
YME1L1Q96TA2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YME1L1Q96TA2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 ZNF444P1-201ENST00000559497 298 ntBASIC20.78■□□□□ 0.92
YME1L1Q96TA2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 AL691432.3-201ENST00000621860 400 ntBASIC20.78■□□□□ 0.92
YME1L1Q96TA2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.78■□□□□ 0.92
YME1L1Q96TA2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YME1L1Q96TA2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.77■□□□□ 0.91
YME1L1Q96TA2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
YME1L1Q96TA2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
YME1L1Q96TA2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 LINC00565-201ENST00000562710 2331 ntBASIC20.76■□□□□ 0.91
YME1L1Q96TA2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 AC083849.1-201ENST00000615227 514 ntBASIC20.76■□□□□ 0.91
YME1L1Q96TA2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YME1L1Q96TA2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.75■□□□□ 0.91
YME1L1Q96TA2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 NEK4P2-201ENST00000580004 1012 ntBASIC20.75■□□□□ 0.91
YME1L1Q96TA2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YME1L1Q96TA2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms