Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 HBZP1-201ENST00000354915 429 ntBASIC18.9■□□□□ 0.62
PCDH15Q96QU1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH15Q96QU1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.89■□□□□ 0.62
PCDH15Q96QU1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH15Q96QU1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.89■□□□□ 0.62
PCDH15Q96QU1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
PCDH15Q96QU1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 AL512408.1-201ENST00000569378 2000 ntBASIC18.89■□□□□ 0.61
PCDH15Q96QU1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 AC092667.1-201ENST00000434301 2586 ntBASIC18.89■□□□□ 0.61
PCDH15Q96QU1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH15Q96QU1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH15Q96QU1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 AC246785.2-201ENST00000432512 513 ntBASIC18.87■□□□□ 0.61
PCDH15Q96QU1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 GCSHP2-201ENST00000560971 527 ntBASIC18.87■□□□□ 0.61
PCDH15Q96QU1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH15Q96QU1 KRT8P11-201ENST00000409686 1436 ntBASIC18.86■□□□□ 0.61
PCDH15Q96QU1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 LINC01311-201ENST00000565162 1445 ntBASIC18.86■□□□□ 0.61
PCDH15Q96QU1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 AC140113.3-201ENST00000605663 199 ntBASIC18.86■□□□□ 0.61
PCDH15Q96QU1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH15Q96QU1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms