Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD1Q96PZ7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 AC092597.1-201ENST00000487352 616 ntBASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 AC091304.2-201ENST00000564639 760 ntBASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 AC027796.2-201ENST00000575326 344 ntBASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.49■□□□□ 0.23
CSMD1Q96PZ7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 Z98882.1-201ENST00000622160 2253 ntBASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD1Q96PZ7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 FEM1AP4-201ENST00000443167 1987 ntBASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 HBZP1-201ENST00000354915 429 ntBASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 STARP1-201ENST00000397973 869 ntBASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 BX842568.4-201ENST00000421222 227 ntBASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 NUS1P1-201ENST00000446295 882 ntBASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 PMS2P2-201ENST00000425039 1128 ntBASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD1Q96PZ7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms