Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 HLA-A-209ENST00000638375 975 ntBASIC22.9■■□□□ 1.26
NEK1Q96PY6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 AC087289.5-201ENST00000586076 3175 ntBASIC22.9■■□□□ 1.26
NEK1Q96PY6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 AC018445.3-201ENST00000624177 1945 ntBASIC22.9■■□□□ 1.26
NEK1Q96PY6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
NEK1Q96PY6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
NEK1Q96PY6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
NEK1Q96PY6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK1Q96PY6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK1Q96PY6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.89■■□□□ 1.26
NEK1Q96PY6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK1Q96PY6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.89■■□□□ 1.26
NEK1Q96PY6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
NEK1Q96PY6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK1Q96PY6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
NEK1Q96PY6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
NEK1Q96PY6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NEK1Q96PY6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.89■■□□□ 1.25
NEK1Q96PY6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NEK1Q96PY6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NEK1Q96PY6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
NEK1Q96PY6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NEK1Q96PY6 C1QBPP2-201ENST00000528754 825 ntBASIC22.89■■□□□ 1.25
NEK1Q96PY6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.89■■□□□ 1.25
NEK1Q96PY6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NEK1Q96PY6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NEK1Q96PY6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.89■■□□□ 1.25
NEK1Q96PY6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.89■■□□□ 1.25
NEK1Q96PY6 AC141586.3-201ENST00000562166 1838 ntBASIC22.89■■□□□ 1.25
NEK1Q96PY6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NEK1Q96PY6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.89■■□□□ 1.25
NEK1Q96PY6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
NEK1Q96PY6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.88■■□□□ 1.25
NEK1Q96PY6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.88■■□□□ 1.25
NEK1Q96PY6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.88■■□□□ 1.25
NEK1Q96PY6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.88■■□□□ 1.25
NEK1Q96PY6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.88■■□□□ 1.25
NEK1Q96PY6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
NEK1Q96PY6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
NEK1Q96PY6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
NEK1Q96PY6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
NEK1Q96PY6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 BX323043.1-201ENST00000641006 1765 ntBASIC22.87■■□□□ 1.25
NEK1Q96PY6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 ITM2C-210ENST00000620962 501 ntBASIC22.87■■□□□ 1.25
NEK1Q96PY6 AP000974.1-201ENST00000623909 2387 ntBASIC22.87■■□□□ 1.25
NEK1Q96PY6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 AC098818.2-201ENST00000564925 2320 ntBASIC22.87■■□□□ 1.25
NEK1Q96PY6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.87■■□□□ 1.25
NEK1Q96PY6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
NEK1Q96PY6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NEK1Q96PY6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms