Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GAFA1Q96PS6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.1■□□□□ 0.17
GAFA1Q96PS6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 AC008550.1-201ENST00000511500 884 ntBASIC16.1■□□□□ 0.17
GAFA1Q96PS6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 Z99916.2-201ENST00000604037 246 ntBASIC16.1■□□□□ 0.17
GAFA1Q96PS6 CR392000.1-201ENST00000624770 1228 ntBASIC16.1■□□□□ 0.17
GAFA1Q96PS6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 KRT16P1-201ENST00000399124 1418 ntBASIC16.1■□□□□ 0.17
GAFA1Q96PS6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GAFA1Q96PS6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 AC004980.1-204ENST00000429707 299 ntBASIC16.09■□□□□ 0.17
GAFA1Q96PS6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 AC233702.5-201ENST00000584107 538 ntBASIC16.09■□□□□ 0.17
GAFA1Q96PS6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GAFA1Q96PS6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
GAFA1Q96PS6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
GAFA1Q96PS6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 FAM197Y1-201ENST00000421178 764 ntBASIC16.08■□□□□ 0.16
GAFA1Q96PS6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.08■□□□□ 0.16
GAFA1Q96PS6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 AC113410.3-201ENST00000623366 203 ntBASIC16.08■□□□□ 0.16
GAFA1Q96PS6 AC131212.4-201ENST00000623606 975 ntBASIC16.08■□□□□ 0.16
GAFA1Q96PS6 AP006294.2-201ENST00000641667 209 ntBASIC16.08■□□□□ 0.16
GAFA1Q96PS6 AL049637.2-201ENST00000641778 930 ntBASIC16.08■□□□□ 0.16
GAFA1Q96PS6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GAFA1Q96PS6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms