Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 RN7SL471P-201ENST00000580476 299 ntBASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDLIM5Q96HC4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 KRT16P5-201ENST00000455284 522 ntBASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 HLA-A-209ENST00000638375 975 ntBASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDLIM5Q96HC4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDLIM5Q96HC4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.89■□□□□ 0.62
PDLIM5Q96HC4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PDLIM5Q96HC4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PDLIM5Q96HC4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 AL160286.2-201ENST00000567150 934 ntBASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 AL023875.1-201ENST00000640777 796 ntBASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDLIM5Q96HC4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 FP475955.4-201ENST00000623131 1990 ntBASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 AC124016.1-201ENST00000609552 612 ntBASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms