Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 AL596275.1-201ENST00000423464 877 ntBASIC16.32■□□□□ 0.2
NEIL1Q96FI4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 MIR4497-201ENST00000583208 89 ntBASIC16.32■□□□□ 0.2
NEIL1Q96FI4 AF186192.3-201ENST00000583427 947 ntBASIC16.32■□□□□ 0.2
NEIL1Q96FI4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEIL1Q96FI4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 SNORA78-201ENST00000459373 127 ntBASIC16.31■□□□□ 0.2
NEIL1Q96FI4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 AC073195.1-201ENST00000607241 877 ntBASIC16.31■□□□□ 0.2
NEIL1Q96FI4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEIL1Q96FI4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 AL691432.2-201ENST00000607222 2038 ntBASIC16.3■□□□□ 0.2
NEIL1Q96FI4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 AC099778.1-201ENST00000568593 1911 ntBASIC16.3■□□□□ 0.2
NEIL1Q96FI4 AC018445.3-201ENST00000624177 1945 ntBASIC16.3■□□□□ 0.2
NEIL1Q96FI4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 C1QL1P1-201ENST00000568105 661 ntBASIC16.3■□□□□ 0.2
NEIL1Q96FI4 AL353708.3-201ENST00000610272 989 ntBASIC16.3■□□□□ 0.2
NEIL1Q96FI4 AC113410.3-201ENST00000623366 203 ntBASIC16.3■□□□□ 0.2
NEIL1Q96FI4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 BX323043.1-201ENST00000641006 1765 ntBASIC16.3■□□□□ 0.2
NEIL1Q96FI4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 AC009237.14-201ENST00000609975 1594 ntBASIC16.3■□□□□ 0.2
NEIL1Q96FI4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEIL1Q96FI4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 KRT17P2-201ENST00000300992 1314 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms