Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC97Q96F63 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC97Q96F63 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.7■□□□□ 0.74
CCDC97Q96F63 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 AC233263.1-201ENST00000578059 224 ntBASIC19.7■□□□□ 0.74
CCDC97Q96F63 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC97Q96F63 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC97Q96F63 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 AC007952.6-201ENST00000573168 2673 ntBASIC19.69■□□□□ 0.74
CCDC97Q96F63 AC003957.1-201ENST00000625108 2673 ntBASIC19.69■□□□□ 0.74
CCDC97Q96F63 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC97Q96F63 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC97Q96F63 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC97Q96F63 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.69■□□□□ 0.74
CCDC97Q96F63 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC97Q96F63 RN7SL471P-201ENST00000580476 299 ntBASIC19.69■□□□□ 0.74
CCDC97Q96F63 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC97Q96F63 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC97Q96F63 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC97Q96F63 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC97Q96F63 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC97Q96F63 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC97Q96F63 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC97Q96F63 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC97Q96F63 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC97Q96F63 HLA-G-202ENST00000376815 851 ntBASIC19.68■□□□□ 0.74
CCDC97Q96F63 HLA-G-203ENST00000376818 1127 ntBASIC19.68■□□□□ 0.74
CCDC97Q96F63 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC97Q96F63 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC97Q96F63 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC97Q96F63 REXO1L12P-201ENST00000622156 912 ntBASIC19.68■□□□□ 0.74
CCDC97Q96F63 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC97Q96F63 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC97Q96F63 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC97Q96F63 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC97Q96F63 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC97Q96F63 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC97Q96F63 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms