Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 C1QL1P1-201ENST00000568105 661 ntBASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIP3Q96DZ5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 MMP23A-201ENST00000234610 1017 ntBASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 UNC93B2-201ENST00000285383 730 ntBASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 BX119927.1-201ENST00000636596 1552 ntBASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIP3Q96DZ5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 KRT18P16-201ENST00000510337 1294 ntBASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 REXO1L10P-201ENST00000615707 1290 ntBASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLIP3Q96DZ5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 AC112907.3-201ENST00000577781 2400 ntBASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP3Q96DZ5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms