Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ECHDC3Q96DC8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 SDHAP1-207ENST00000440850 2000 ntBASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ECHDC3Q96DC8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 FITM1-202ENST00000559294 800 ntBASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 AP000525.1-201ENST00000608286 694 ntBASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 AC073912.3-201ENST00000624414 853 ntBASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 Z82202.1-201ENST00000623446 1880 ntBASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 SLC25A24-204ENST00000569674 2357 ntBASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ECHDC3Q96DC8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 AC096733.2-201ENST00000609937 1394 ntBASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 FAM207BP-201ENST00000447172 505 ntBASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 AP005242.2-201ENST00000580065 1175 ntBASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ECHDC3Q96DC8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.34■□□□□ 0.69
ECHDC3Q96DC8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms