Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM54Q969K7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TMEM54Q969K7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 NIFKP9-201ENST00000419265 221 ntBASIC17.05■□□□□ 0.32
TMEM54Q969K7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 RARRES2P10-201ENST00000564312 460 ntBASIC17.05■□□□□ 0.32
TMEM54Q969K7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 AL445675.2-201ENST00000620291 557 ntBASIC17.05■□□□□ 0.32
TMEM54Q969K7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM54Q969K7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM54Q969K7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 AL353807.1-201ENST00000427475 662 ntBASIC17.04■□□□□ 0.32
TMEM54Q969K7 GCSHP5-201ENST00000443090 522 ntBASIC17.04■□□□□ 0.32
TMEM54Q969K7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.04■□□□□ 0.32
TMEM54Q969K7 AP002982.1-201ENST00000492365 877 ntBASIC17.04■□□□□ 0.32
TMEM54Q969K7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM54Q969K7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM54Q969K7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TMEM54Q969K7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM54Q969K7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms