Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
RAPGEF4Q8WZA2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RAPGEF4Q8WZA2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 PKD1P6-201ENST00000343738 4769 ntBASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 KRT126P-201ENST00000549467 1181 ntBASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 AC116407.4-201ENST00000623319 1061 ntBASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
RAPGEF4Q8WZA2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RAPGEF4Q8WZA2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC25.39■■□□□ 1.65
RAPGEF4Q8WZA2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RAPGEF4Q8WZA2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RAPGEF4Q8WZA2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 KRT18P48-201ENST00000434763 852 ntBASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 NEK4P2-201ENST00000580004 1012 ntBASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
RAPGEF4Q8WZA2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RAPGEF4Q8WZA2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 VENTXP5-201ENST00000523979 775 ntBASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RAPGEF4Q8WZA2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 AC112907.2-201ENST00000448639 330 ntBASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 AL136038.3-201ENST00000561909 1096 ntBASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RAPGEF4Q8WZA2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms