Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CKBP1-201ENST00000565489 1086 ntBASIC19.41■□□□□ 0.7
HMGB4Q8WW32 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.41■□□□□ 0.7
HMGB4Q8WW32 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 AP000550.4-202ENST00000639755 178 ntBASIC19.4■□□□□ 0.7
HMGB4Q8WW32 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 KRT8P41-201ENST00000533985 1514 ntBASIC19.4■□□□□ 0.7
HMGB4Q8WW32 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HMGB4Q8WW32 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGB4Q8WW32 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
HMGB4Q8WW32 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGB4Q8WW32 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.7
HMGB4Q8WW32 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 HOMER2P1-201ENST00000455653 964 ntBASIC19.39■□□□□ 0.69
HMGB4Q8WW32 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HMGB4Q8WW32 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 PCED1CP-201ENST00000419887 785 ntBASIC19.38■□□□□ 0.69
HMGB4Q8WW32 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 AL441883.1-201ENST00000566170 1045 ntBASIC19.38■□□□□ 0.69
HMGB4Q8WW32 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGB4Q8WW32 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms