Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 AC010947.1-201ENST00000623454 693 ntBASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 RNF165-205ENST00000588679 2904 ntBASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF548Q8NEK5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZNF548Q8NEK5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 AC005521.1-201ENST00000393351 872 ntBASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 AC113347.1-201ENST00000413321 391 ntBASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 AC004980.1-204ENST00000429707 299 ntBASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 B3GAT3P1-201ENST00000471720 806 ntBASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 KRT18P22-201ENST00000402024 1347 ntBASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF548Q8NEK5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 DGCR10-201ENST00000609839 495 ntBASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 AC125437.2-201ENST00000625180 2167 ntBASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF548Q8NEK5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF548Q8NEK5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms