Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 PGM5P4-201ENST00000421970 445 ntBASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 AL356652.1-201ENST00000615962 565 ntBASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC197Q8NCU1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC197Q8NCU1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 AL358852.1-201ENST00000623174 1268 ntBASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC197Q8NCU1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 AC106820.2-201ENST00000563775 3264 ntBASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC197Q8NCU1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 KRT87P-202ENST00000534226 1464 ntBASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC197Q8NCU1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms