Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NME8Q8N427 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.29■■□□□ 1
NME8Q8N427 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.29■■□□□ 1
NME8Q8N427 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.29■■□□□ 1
NME8Q8N427 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.29■■□□□ 1
NME8Q8N427 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.29■■□□□ 1
NME8Q8N427 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.29■■□□□ 1
NME8Q8N427 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
NME8Q8N427 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NME8Q8N427 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.29■■□□□ 1
NME8Q8N427 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NME8Q8N427 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.29■■□□□ 1
NME8Q8N427 KRT8P41-201ENST00000533985 1514 ntBASIC21.29■■□□□ 1
NME8Q8N427 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NME8Q8N427 AC092338.2-201ENST00000568827 1415 ntBASIC21.29■■□□□ 1
NME8Q8N427 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
NME8Q8N427 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.28■■□□□ 1
NME8Q8N427 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.28■■□□□ 1
NME8Q8N427 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
NME8Q8N427 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.28■■□□□ 1
NME8Q8N427 AL353719.1-201ENST00000566847 864 ntBASIC21.28■■□□□ 1
NME8Q8N427 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.28■■□□□ 1
NME8Q8N427 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.28■■□□□ 1
NME8Q8N427 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.28■■□□□ 1
NME8Q8N427 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
NME8Q8N427 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.28■■□□□ 1
NME8Q8N427 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.27■■□□□ 1
NME8Q8N427 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NME8Q8N427 AC073130.3-201ENST00000624389 2278 ntBASIC21.27■■□□□ 1
NME8Q8N427 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.27■■□□□ 1
NME8Q8N427 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NME8Q8N427 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.27■■□□□ 1
NME8Q8N427 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.27■■□□□ 1
NME8Q8N427 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NME8Q8N427 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
NME8Q8N427 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.27■■□□□ 1
NME8Q8N427 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.27■■□□□ 1
NME8Q8N427 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.27■■□□□ 1
NME8Q8N427 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NME8Q8N427 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NME8Q8N427 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NME8Q8N427 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NME8Q8N427 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NME8Q8N427 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.26■□□□□ 0.99
NME8Q8N427 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NME8Q8N427 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NME8Q8N427 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.26■□□□□ 0.99
NME8Q8N427 CKBP1-201ENST00000565489 1086 ntBASIC21.26■□□□□ 0.99
NME8Q8N427 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.26■□□□□ 0.99
NME8Q8N427 AC006011.2-201ENST00000621313 1158 ntBASIC21.26■□□□□ 0.99
NME8Q8N427 AL138966.2-201ENST00000621997 464 ntBASIC21.26■□□□□ 0.99
NME8Q8N427 RNF165-205ENST00000588679 2904 ntBASIC21.26■□□□□ 0.99
NME8Q8N427 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NME8Q8N427 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.26■□□□□ 0.99
NME8Q8N427 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NME8Q8N427 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NME8Q8N427 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NME8Q8N427 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
NME8Q8N427 LINC01465-201ENST00000408887 1940 ntBASIC21.25■□□□□ 0.99
NME8Q8N427 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
NME8Q8N427 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
NME8Q8N427 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.25■□□□□ 0.99
NME8Q8N427 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
NME8Q8N427 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.25■□□□□ 0.99
NME8Q8N427 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.25■□□□□ 0.99
NME8Q8N427 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.25■□□□□ 0.99
NME8Q8N427 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.25■□□□□ 0.99
NME8Q8N427 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NME8Q8N427 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.25■□□□□ 0.99
NME8Q8N427 AL512604.3-201ENST00000569583 964 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms