Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 AP005242.2-201ENST00000580065 1175 ntBASIC20.15■□□□□ 0.82
SCML4Q8N228 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.15■□□□□ 0.82
SCML4Q8N228 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCML4Q8N228 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.15■□□□□ 0.82
SCML4Q8N228 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.15■□□□□ 0.82
SCML4Q8N228 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCML4Q8N228 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SCML4Q8N228 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SCML4Q8N228 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SCML4Q8N228 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCML4Q8N228 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCML4Q8N228 AC079598.2-202ENST00000546624 1451 ntBASIC20.14■□□□□ 0.81
SCML4Q8N228 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCML4Q8N228 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCML4Q8N228 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCML4Q8N228 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCML4Q8N228 FAM207BP-201ENST00000447172 505 ntBASIC20.14■□□□□ 0.81
SCML4Q8N228 FITM1-202ENST00000559294 800 ntBASIC20.14■□□□□ 0.81
SCML4Q8N228 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.14■□□□□ 0.81
SCML4Q8N228 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SCML4Q8N228 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SCML4Q8N228 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.14■□□□□ 0.81
SCML4Q8N228 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
SCML4Q8N228 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCML4Q8N228 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCML4Q8N228 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCML4Q8N228 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCML4Q8N228 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCML4Q8N228 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCML4Q8N228 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.13■□□□□ 0.81
SCML4Q8N228 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SCML4Q8N228 TSPY15P-201ENST00000457163 923 ntBASIC20.13■□□□□ 0.81
SCML4Q8N228 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.13■□□□□ 0.81
SCML4Q8N228 PRSS44-201ENST00000515154 1146 ntBASIC20.13■□□□□ 0.81
SCML4Q8N228 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.13■□□□□ 0.81
SCML4Q8N228 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.13■□□□□ 0.81
SCML4Q8N228 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.13■□□□□ 0.81
SCML4Q8N228 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.13■□□□□ 0.81
SCML4Q8N228 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCML4Q8N228 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCML4Q8N228 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.12■□□□□ 0.81
SCML4Q8N228 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCML4Q8N228 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCML4Q8N228 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCML4Q8N228 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCML4Q8N228 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SCML4Q8N228 BX088651.1-201ENST00000540551 451 ntBASIC20.12■□□□□ 0.81
SCML4Q8N228 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.12■□□□□ 0.81
SCML4Q8N228 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCML4Q8N228 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.12■□□□□ 0.81
SCML4Q8N228 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.12■□□□□ 0.81
SCML4Q8N228 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCML4Q8N228 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.11■□□□□ 0.81
SCML4Q8N228 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SCML4Q8N228 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.11■□□□□ 0.81
SCML4Q8N228 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.11■□□□□ 0.81
SCML4Q8N228 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.11■□□□□ 0.81
SCML4Q8N228 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SCML4Q8N228 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCML4Q8N228 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.1■□□□□ 0.81
SCML4Q8N228 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SCML4Q8N228 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SCML4Q8N228 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
SCML4Q8N228 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.1■□□□□ 0.81
SCML4Q8N228 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.1■□□□□ 0.81
SCML4Q8N228 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCML4Q8N228 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.1■□□□□ 0.81
SCML4Q8N228 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms