Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 AC128688.1-201ENST00000487626 519 ntBASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RP1L1Q8IWN7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 CKBP1-201ENST00000565489 1086 ntBASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RP1L1Q8IWN7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 AC083849.1-201ENST00000615227 514 ntBASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 AC011298.2-201ENST00000617989 482 ntBASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 AL023973.1-201ENST00000624619 620 ntBASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RP1L1Q8IWN7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms