Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKL3Q8IVW4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 ID1-201ENST00000376105 1233 ntBASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 SDHAP1-207ENST00000440850 2000 ntBASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKL3Q8IVW4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
CDKL3Q8IVW4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 AL161938.1-201ENST00000569833 2180 ntBASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 RNA5SP413-201ENST00000516373 109 ntBASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDKL3Q8IVW4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms