Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 PWWP2AP1-201ENST00000429776 2273 ntBASIC19■□□□□ 0.63
LRRTM4Q86VH4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM4Q86VH4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM4Q86VH4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 MESTP1-201ENST00000404287 994 ntBASIC19■□□□□ 0.63
LRRTM4Q86VH4 TSPY15P-201ENST00000457163 923 ntBASIC19■□□□□ 0.63
LRRTM4Q86VH4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 BX088651.1-201ENST00000540551 451 ntBASIC19■□□□□ 0.63
LRRTM4Q86VH4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 AC011298.2-201ENST00000617989 482 ntBASIC19■□□□□ 0.63
LRRTM4Q86VH4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM4Q86VH4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM4Q86VH4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM4Q86VH4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM4Q86VH4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRTM4Q86VH4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19■□□□□ 0.63
LRRTM4Q86VH4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM4Q86VH4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 DGCR10-201ENST00000609839 495 ntBASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM4Q86VH4 AC104417.2-201ENST00000562989 1793 ntBASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 AC073912.3-201ENST00000624414 853 ntBASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRTM4Q86VH4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRRTM4Q86VH4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms