Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP45Q70EL2 AC026471.5-201ENST00000615068 467 ntBASIC19.42■□□□□ 0.7
USP45Q70EL2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.42■□□□□ 0.7
USP45Q70EL2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP45Q70EL2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP45Q70EL2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP45Q70EL2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP45Q70EL2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP45Q70EL2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP45Q70EL2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP45Q70EL2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.42■□□□□ 0.7
USP45Q70EL2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
USP45Q70EL2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.41■□□□□ 0.7
USP45Q70EL2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.41■□□□□ 0.7
USP45Q70EL2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
USP45Q70EL2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.41■□□□□ 0.7
USP45Q70EL2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.41■□□□□ 0.7
USP45Q70EL2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
USP45Q70EL2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
USP45Q70EL2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.41■□□□□ 0.7
USP45Q70EL2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 NUDT16P1-203ENST00000513809 620 ntBASIC19.41■□□□□ 0.7
USP45Q70EL2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.41■□□□□ 0.7
USP45Q70EL2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.41■□□□□ 0.7
USP45Q70EL2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.41■□□□□ 0.7
USP45Q70EL2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.41■□□□□ 0.7
USP45Q70EL2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.41■□□□□ 0.7
USP45Q70EL2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP45Q70EL2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.41■□□□□ 0.7
USP45Q70EL2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
USP45Q70EL2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
USP45Q70EL2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
USP45Q70EL2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.4■□□□□ 0.7
USP45Q70EL2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.4■□□□□ 0.7
USP45Q70EL2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.4■□□□□ 0.7
USP45Q70EL2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.4■□□□□ 0.7
USP45Q70EL2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.4■□□□□ 0.7
USP45Q70EL2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.4■□□□□ 0.7
USP45Q70EL2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.4■□□□□ 0.7
USP45Q70EL2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.4■□□□□ 0.7
USP45Q70EL2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.4■□□□□ 0.7
USP45Q70EL2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.4■□□□□ 0.7
USP45Q70EL2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
USP45Q70EL2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.4■□□□□ 0.7
USP45Q70EL2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP45Q70EL2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.4■□□□□ 0.7
USP45Q70EL2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
USP45Q70EL2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
USP45Q70EL2 LINC01465-201ENST00000408887 1940 ntBASIC19.39■□□□□ 0.7
USP45Q70EL2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP45Q70EL2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
USP45Q70EL2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.39■□□□□ 0.69
USP45Q70EL2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP45Q70EL2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.39■□□□□ 0.69
USP45Q70EL2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.39■□□□□ 0.69
USP45Q70EL2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP45Q70EL2 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.39■□□□□ 0.69
USP45Q70EL2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP45Q70EL2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP45Q70EL2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP45Q70EL2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
USP45Q70EL2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
USP45Q70EL2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP45Q70EL2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.39■□□□□ 0.69
USP45Q70EL2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP45Q70EL2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP45Q70EL2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
USP45Q70EL2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP45Q70EL2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP45Q70EL2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP45Q70EL2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP45Q70EL2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP45Q70EL2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP45Q70EL2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms