Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 MIR4466-201ENST00000606121 54 ntBASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 ESPNP-201ENST00000270691 2015 ntBASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 AC080080.1-201ENST00000625121 2420 ntBASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14□□□□□ -0.17
LINC00173Q6ZV60 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14□□□□□ -0.17
LINC00173Q6ZV60 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14□□□□□ -0.17
LINC00173Q6ZV60 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LINC00173Q6ZV60 IGHV3-19-201ENST00000521488 291 ntBASIC14□□□□□ -0.17
LINC00173Q6ZV60 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14□□□□□ -0.17
LINC00173Q6ZV60 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14□□□□□ -0.17
LINC00173Q6ZV60 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC00173Q6ZV60 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 AL512353.2-201ENST00000448759 1962 ntBASIC14□□□□□ -0.17
LINC00173Q6ZV60 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
LINC00173Q6ZV60 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00173Q6ZV60 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14□□□□□ -0.17
LINC00173Q6ZV60 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 LINC00896-202ENST00000609602 2128 ntBASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 TEX21P-204ENST00000641479 1693 ntBASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00173Q6ZV60 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms