Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 AC026366.1-201ENST00000488803 879 ntBASIC17.59■□□□□ 0.41
NIPAL3Q6P499 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NIPAL3Q6P499 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
NIPAL3Q6P499 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.58■□□□□ 0.41
NIPAL3Q6P499 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NIPAL3Q6P499 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NIPAL3Q6P499 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.58■□□□□ 0.41
NIPAL3Q6P499 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.58■□□□□ 0.41
NIPAL3Q6P499 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 AC120498.9-201ENST00000339021 3867 ntBASIC17.58■□□□□ 0.4
NIPAL3Q6P499 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NIPAL3Q6P499 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 ESRRAP1-201ENST00000400596 1257 ntBASIC17.57■□□□□ 0.4
NIPAL3Q6P499 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 MIR4651-201ENST00000582622 73 ntBASIC17.57■□□□□ 0.4
NIPAL3Q6P499 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 AC008403.3-201ENST00000598924 454 ntBASIC17.57■□□□□ 0.4
NIPAL3Q6P499 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NIPAL3Q6P499 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 AC018553.1-201ENST00000616682 1458 ntBASIC17.56■□□□□ 0.4
NIPAL3Q6P499 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms