Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 AC125437.2-201ENST00000625180 2167 ntBASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC178Q5BJE1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC178Q5BJE1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 AC011298.2-201ENST00000617989 482 ntBASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC178Q5BJE1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 RBM17P1-201ENST00000453646 1190 ntBASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 AP000692.2-201ENST00000608391 879 ntBASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC178Q5BJE1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 AC091390.4-202ENST00000476426 537 ntBASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC178Q5BJE1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 FAM207BP-201ENST00000447172 505 ntBASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 KRT8P41-201ENST00000533985 1514 ntBASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CCDC178Q5BJE1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CCDC178Q5BJE1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC178Q5BJE1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC178Q5BJE1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms