Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 AC093525.10-201ENST00000625130 1569 ntBASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 SDHAP1-207ENST00000440850 2000 ntBASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 FP475955.4-201ENST00000623131 1990 ntBASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 AC009113.1-201ENST00000570267 2443 ntBASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RUNDC3AQ59EK9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 MKRN4P-201ENST00000444706 1521 ntBASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 AC104581.1-202ENST00000635932 2618 ntBASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.24■□□□□ 0.51
RUNDC3AQ59EK9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 BX276092.2-201ENST00000417668 665 ntBASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RUNDC3AQ59EK9 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RUNDC3AQ59EK9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms