Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPN20Q4JDL3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPN20Q4JDL3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 AL158047.1-201ENST00000445918 881 ntBASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPN20Q4JDL3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 NIFKP9-201ENST00000419265 221 ntBASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTPN20Q4JDL3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 RARRES2P10-201ENST00000564312 460 ntBASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 AL160286.2-201ENST00000567150 934 ntBASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 AL353708.3-201ENST00000610272 989 ntBASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms