Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 IL9RP2-201ENST00000423948 1312 ntBASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 CLDN5-201ENST00000403084 2357 ntBASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 LINC00265-3P-201ENST00000447588 903 ntBASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 KRT18P58-201ENST00000527480 1120 ntBASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO4Q2I0M5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RSPO4Q2I0M5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
RSPO4Q2I0M5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 AL139424.1-201ENST00000607572 797 ntBASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RSPO4Q2I0M5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 KRT16P4-201ENST00000453883 522 ntBASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RSPO4Q2I0M5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 AC034232.1-201ENST00000506026 1064 ntBASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RSPO4Q2I0M5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO4Q2I0M5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO4Q2I0M5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RSPO4Q2I0M5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms