Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
SKP1P63208 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SKP1P63208 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.39■□□□□ 0.53
SKP1P63208 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.39■□□□□ 0.53
SKP1P63208 AC066615.1-201ENST00000640911 628 ntBASIC18.39■□□□□ 0.53
SKP1P63208 AL031985.4-201ENST00000642138 673 ntBASIC18.39■□□□□ 0.53
SKP1P63208 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.39■□□□□ 0.53
SKP1P63208 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SKP1P63208 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.39■□□□□ 0.53
SKP1P63208 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.39■□□□□ 0.53
SKP1P63208 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.39■□□□□ 0.53
SKP1P63208 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SKP1P63208 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SKP1P63208 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SKP1P63208 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.38■□□□□ 0.53
SKP1P63208 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.38■□□□□ 0.53
SKP1P63208 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
SKP1P63208 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SKP1P63208 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.38■□□□□ 0.53
SKP1P63208 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.38■□□□□ 0.53
SKP1P63208 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.38■□□□□ 0.53
SKP1P63208 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.38■□□□□ 0.53
SKP1P63208 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.38■□□□□ 0.53
SKP1P63208 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.38■□□□□ 0.53
SKP1P63208 MIR4785-201ENST00000585005 73 ntBASIC18.38■□□□□ 0.53
SKP1P63208 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.38■□□□□ 0.53
SKP1P63208 CD177P1-201ENST00000606252 935 ntBASIC18.38■□□□□ 0.53
SKP1P63208 KRT17P2-201ENST00000300992 1314 ntBASIC18.38■□□□□ 0.53
SKP1P63208 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SKP1P63208 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.38■□□□□ 0.53
SKP1P63208 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SKP1P63208 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.38■□□□□ 0.53
SKP1P63208 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.38■□□□□ 0.53
SKP1P63208 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SKP1P63208 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SKP1P63208 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.37■□□□□ 0.53
SKP1P63208 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SKP1P63208 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SKP1P63208 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.37■□□□□ 0.53
SKP1P63208 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SKP1P63208 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SKP1P63208 AL160286.2-201ENST00000567150 934 ntBASIC18.37■□□□□ 0.53
SKP1P63208 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.37■□□□□ 0.53
SKP1P63208 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.37■□□□□ 0.53
SKP1P63208 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.37■□□□□ 0.53
SKP1P63208 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.37■□□□□ 0.53
SKP1P63208 HLA-A-209ENST00000638375 975 ntBASIC18.37■□□□□ 0.53
SKP1P63208 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SKP1P63208 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SKP1P63208 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SKP1P63208 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SKP1P63208 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.37■□□□□ 0.53
SKP1P63208 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SKP1P63208 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.36■□□□□ 0.53
SKP1P63208 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SKP1P63208 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.36■□□□□ 0.53
SKP1P63208 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.36■□□□□ 0.53
SKP1P63208 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SKP1P63208 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.36■□□□□ 0.53
SKP1P63208 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.36■□□□□ 0.53
SKP1P63208 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SKP1P63208 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.36■□□□□ 0.53
SKP1P63208 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.36■□□□□ 0.53
SKP1P63208 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.36■□□□□ 0.53
SKP1P63208 Z99916.2-201ENST00000604037 246 ntBASIC18.36■□□□□ 0.53
SKP1P63208 CR392000.1-201ENST00000624770 1228 ntBASIC18.36■□□□□ 0.53
SKP1P63208 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.36■□□□□ 0.53
SKP1P63208 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SKP1P63208 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SKP1P63208 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SKP1P63208 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SKP1P63208 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SKP1P63208 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SKP1P63208 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SKP1P63208 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SKP1P63208 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SKP1P63208 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SKP1P63208 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms