Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.7■□□□□ 0.42
CDC42P60953 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC42P60953 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDC42P60953 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.7■□□□□ 0.42
CDC42P60953 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDC42P60953 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC42P60953 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CDC42P60953 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDC42P60953 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CDC42P60953 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDC42P60953 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.69■□□□□ 0.42
CDC42P60953 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 OR6D1P-202ENST00000641007 5290 ntBASIC17.69■□□□□ 0.42
CDC42P60953 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDC42P60953 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.69■□□□□ 0.42
CDC42P60953 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDC42P60953 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 AC007322.4-201ENST00000509611 723 ntBASIC17.69■□□□□ 0.42
CDC42P60953 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.69■□□□□ 0.42
CDC42P60953 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.69■□□□□ 0.42
CDC42P60953 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.69■□□□□ 0.42
CDC42P60953 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CDC42P60953 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDC42P60953 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDC42P60953 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CDC42P60953 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.68■□□□□ 0.42
CDC42P60953 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.68■□□□□ 0.42
CDC42P60953 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 AC023632.3-201ENST00000521633 145 ntBASIC17.68■□□□□ 0.42
CDC42P60953 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.68■□□□□ 0.42
CDC42P60953 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.68■□□□□ 0.42
CDC42P60953 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.68■□□□□ 0.42
CDC42P60953 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.68■□□□□ 0.42
CDC42P60953 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDC42P60953 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC42P60953 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDC42P60953 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC42P60953 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDC42P60953 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 WIZP1-201ENST00000531444 2299 ntBASIC17.67■□□□□ 0.42
CDC42P60953 Z98044.1-201ENST00000632503 1764 ntBASIC17.67■□□□□ 0.42
CDC42P60953 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC42P60953 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDC42P60953 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC42P60953 AC013268.1-206ENST00000638368 961 ntBASIC17.67■□□□□ 0.42
CDC42P60953 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.67■□□□□ 0.42
CDC42P60953 AC112229.1-201ENST00000639295 961 ntBASIC17.67■□□□□ 0.42
CDC42P60953 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CDC42P60953 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CDC42P60953 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC42P60953 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
CDC42P60953 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDC42P60953 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.67■□□□□ 0.42
CDC42P60953 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDC42P60953 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.66■□□□□ 0.42
CDC42P60953 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC42P60953 AL031598.1-201ENST00000561511 1773 ntBASIC17.66■□□□□ 0.42
CDC42P60953 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms