Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SEC61BP60468 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC10.4□□□□□ -0.75
SEC61BP60468 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
SEC61BP60468 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SEC61BP60468 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
SEC61BP60468 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SEC61BP60468 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
SEC61BP60468 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC10.39□□□□□ -0.75
SEC61BP60468 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC10.39□□□□□ -0.75
SEC61BP60468 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC10.39□□□□□ -0.75
SEC61BP60468 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC10.39□□□□□ -0.75
SEC61BP60468 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC10.39□□□□□ -0.75
SEC61BP60468 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC10.39□□□□□ -0.75
SEC61BP60468 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 COX11P1-201ENST00000489116 835 ntBASIC10.39□□□□□ -0.75
SEC61BP60468 FDX2-206ENST00000492239 773 ntTSL 2 BASIC10.39□□□□□ -0.75
SEC61BP60468 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 AC022616.7-201ENST00000525383 220 ntBASIC10.39□□□□□ -0.75
SEC61BP60468 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC10.39□□□□□ -0.75
SEC61BP60468 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC10.39□□□□□ -0.75
SEC61BP60468 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
SEC61BP60468 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC10.39□□□□□ -0.75
SEC61BP60468 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC10.39□□□□□ -0.75
SEC61BP60468 AC140113.3-201ENST00000605663 199 ntBASIC10.39□□□□□ -0.75
SEC61BP60468 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC10.39□□□□□ -0.75
SEC61BP60468 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SEC61BP60468 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC10.39□□□□□ -0.75
SEC61BP60468 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SEC61BP60468 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SEC61BP60468 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SEC61BP60468 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC10.38□□□□□ -0.75
SEC61BP60468 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 ANKRD20A18P-201ENST00000359341 492 ntBASIC10.38□□□□□ -0.75
SEC61BP60468 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SEC61BP60468 AC091390.4-202ENST00000476426 537 ntBASIC10.38□□□□□ -0.75
SEC61BP60468 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC10.38□□□□□ -0.75
SEC61BP60468 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC10.38□□□□□ -0.75
SEC61BP60468 RBM42-202ENST00000586618 771 ntTSL 3 BASIC10.38□□□□□ -0.75
SEC61BP60468 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SEC61BP60468 DBP-204ENST00000599385 709 ntTSL 3 BASIC10.38□□□□□ -0.75
SEC61BP60468 FAM87A-204ENST00000613235 858 ntBASIC10.38□□□□□ -0.75
SEC61BP60468 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 AF106564.1-201ENST00000607058 2553 ntBASIC10.38□□□□□ -0.75
SEC61BP60468 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 BX119927.1-201ENST00000636596 1552 ntBASIC10.38□□□□□ -0.75
SEC61BP60468 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SEC61BP60468 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SEC61BP60468 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms