Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PEX3P56589 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.33■■□□□ 1.01
PEX3P56589 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PEX3P56589 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.33■■□□□ 1.01
PEX3P56589 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.33■■□□□ 1.01
PEX3P56589 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.33■■□□□ 1.01
PEX3P56589 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.33■■□□□ 1
PEX3P56589 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PEX3P56589 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.33■■□□□ 1
PEX3P56589 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PEX3P56589 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.32■■□□□ 1
PEX3P56589 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.32■■□□□ 1
PEX3P56589 KRT17P2-201ENST00000300992 1314 ntBASIC21.32■■□□□ 1
PEX3P56589 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.32■■□□□ 1
PEX3P56589 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.32■■□□□ 1
PEX3P56589 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PEX3P56589 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PEX3P56589 Z85996.1-201ENST00000494644 937 ntBASIC21.32■■□□□ 1
PEX3P56589 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.32■■□□□ 1
PEX3P56589 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.32■■□□□ 1
PEX3P56589 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.32■■□□□ 1
PEX3P56589 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.32■■□□□ 1
PEX3P56589 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.32■■□□□ 1
PEX3P56589 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PEX3P56589 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.32■■□□□ 1
PEX3P56589 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.32■■□□□ 1
PEX3P56589 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.32■■□□□ 1
PEX3P56589 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.32■■□□□ 1
PEX3P56589 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PEX3P56589 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PEX3P56589 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
PEX3P56589 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PEX3P56589 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PEX3P56589 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PEX3P56589 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.31■■□□□ 1
PEX3P56589 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.31■■□□□ 1
PEX3P56589 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.31■■□□□ 1
PEX3P56589 AC026271.3-201ENST00000571884 352 ntBASIC21.31■■□□□ 1
PEX3P56589 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.31■■□□□ 1
PEX3P56589 REXO1L10P-201ENST00000615707 1290 ntBASIC21.31■■□□□ 1
PEX3P56589 REXO1L12P-201ENST00000622156 912 ntBASIC21.31■■□□□ 1
PEX3P56589 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.31■■□□□ 1
PEX3P56589 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PEX3P56589 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 SDHAP1-207ENST00000440850 2000 ntBASIC21.31■■□□□ 1
PEX3P56589 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.31■■□□□ 1
PEX3P56589 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PEX3P56589 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
PEX3P56589 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PEX3P56589 Z82202.1-201ENST00000623446 1880 ntBASIC21.3■■□□□ 1
PEX3P56589 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.3■■□□□ 1
PEX3P56589 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
PEX3P56589 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.3■■□□□ 1
PEX3P56589 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PEX3P56589 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PEX3P56589 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.3■■□□□ 1
PEX3P56589 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.3■■□□□ 1
PEX3P56589 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PEX3P56589 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PEX3P56589 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.3■■□□□ 1
PEX3P56589 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.3■■□□□ 1
PEX3P56589 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.3■■□□□ 1
PEX3P56589 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.3■■□□□ 1
PEX3P56589 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
PEX3P56589 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.3■■□□□ 1
PEX3P56589 AC011506.1-201ENST00000474329 610 ntBASIC21.3■■□□□ 1
PEX3P56589 AC116562.2-201ENST00000507042 360 ntBASIC21.3■■□□□ 1
PEX3P56589 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.3■■□□□ 1
PEX3P56589 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PEX3P56589 MIR6786-201ENST00000616843 113 ntBASIC21.3■■□□□ 1
PEX3P56589 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.3■■□□□ 1
PEX3P56589 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PEX3P56589 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.29■■□□□ 1
PEX3P56589 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PEX3P56589 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PEX3P56589 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.29■■□□□ 1
PEX3P56589 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
PEX3P56589 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PEX3P56589 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms