Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SUMO3P55854 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.54■□□□□ 0.4
SUMO3P55854 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SUMO3P55854 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.54■□□□□ 0.4
SUMO3P55854 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.54■□□□□ 0.4
SUMO3P55854 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.54■□□□□ 0.4
SUMO3P55854 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.54■□□□□ 0.4
SUMO3P55854 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.54■□□□□ 0.4
SUMO3P55854 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.54■□□□□ 0.4
SUMO3P55854 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.54■□□□□ 0.4
SUMO3P55854 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.54■□□□□ 0.4
SUMO3P55854 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUMO3P55854 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SUMO3P55854 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
SUMO3P55854 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.53■□□□□ 0.4
SUMO3P55854 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.53■□□□□ 0.4
SUMO3P55854 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SUMO3P55854 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SUMO3P55854 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SUMO3P55854 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SUMO3P55854 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 MIR718-201ENST00000390190 70 ntBASIC17.53■□□□□ 0.4
SUMO3P55854 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.53■□□□□ 0.4
SUMO3P55854 RPS2P55-201ENST00000397318 883 ntBASIC17.53■□□□□ 0.4
SUMO3P55854 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SUMO3P55854 AC004980.1-204ENST00000429707 299 ntBASIC17.53■□□□□ 0.4
SUMO3P55854 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 RPS2P4-201ENST00000476944 856 ntBASIC17.53■□□□□ 0.4
SUMO3P55854 AC107956.1-201ENST00000494359 873 ntBASIC17.53■□□□□ 0.4
SUMO3P55854 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.53■□□□□ 0.4
SUMO3P55854 AC233702.5-201ENST00000584107 538 ntBASIC17.53■□□□□ 0.4
SUMO3P55854 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.53■□□□□ 0.4
SUMO3P55854 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.53■□□□□ 0.4
SUMO3P55854 AP006294.2-201ENST00000641667 209 ntBASIC17.53■□□□□ 0.4
SUMO3P55854 AL031985.4-201ENST00000642138 673 ntBASIC17.53■□□□□ 0.4
SUMO3P55854 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SUMO3P55854 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SUMO3P55854 AC005332.7-201ENST00000614046 2005 ntBASIC17.53■□□□□ 0.4
SUMO3P55854 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.53■□□□□ 0.4
SUMO3P55854 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SUMO3P55854 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUMO3P55854 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SUMO3P55854 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUMO3P55854 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.52■□□□□ 0.4
SUMO3P55854 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.52■□□□□ 0.4
SUMO3P55854 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.52■□□□□ 0.4
SUMO3P55854 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SUMO3P55854 SDHAP1-207ENST00000440850 2000 ntBASIC17.52■□□□□ 0.4
SUMO3P55854 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUMO3P55854 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUMO3P55854 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUMO3P55854 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.52■□□□□ 0.4
SUMO3P55854 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SUMO3P55854 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUMO3P55854 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SUMO3P55854 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SUMO3P55854 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUMO3P55854 TSPY21P-201ENST00000433481 731 ntBASIC17.52■□□□□ 0.4
SUMO3P55854 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.52■□□□□ 0.4
SUMO3P55854 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.52■□□□□ 0.4
SUMO3P55854 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.52■□□□□ 0.4
SUMO3P55854 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUMO3P55854 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUMO3P55854 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUMO3P55854 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SUMO3P55854 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUMO3P55854 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SUMO3P55854 AL032819.2-201ENST00000624543 2162 ntBASIC17.52■□□□□ 0.39
SUMO3P55854 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUMO3P55854 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SUMO3P55854 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SUMO3P55854 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.51■□□□□ 0.39
SUMO3P55854 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SUMO3P55854 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.51■□□□□ 0.39
SUMO3P55854 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms