Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
PMS1P54277 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.29■■□□□ 1
PMS1P54277 CROCCP3-202ENST00000420820 1947 ntBASIC21.29■■□□□ 1
PMS1P54277 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
PMS1P54277 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.29■■□□□ 1
PMS1P54277 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 TUBB8P6-201ENST00000436895 1288 ntBASIC21.29■■□□□ 1
PMS1P54277 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.29■■□□□ 1
PMS1P54277 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.29■■□□□ 1
PMS1P54277 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.29■■□□□ 1
PMS1P54277 AC006333.2-201ENST00000607957 2099 ntBASIC21.28■■□□□ 1
PMS1P54277 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.28■■□□□ 1
PMS1P54277 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PMS1P54277 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.28■■□□□ 1
PMS1P54277 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PMS1P54277 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PMS1P54277 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PMS1P54277 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.28■■□□□ 1
PMS1P54277 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.28■■□□□ 1
PMS1P54277 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 RNA5SP413-201ENST00000516373 109 ntBASIC21.28■■□□□ 1
PMS1P54277 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PMS1P54277 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.28■■□□□ 1
PMS1P54277 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PMS1P54277 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.28■■□□□ 1
PMS1P54277 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.28■■□□□ 1
PMS1P54277 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.28■■□□□ 1
PMS1P54277 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS1P54277 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.27■■□□□ 1
PMS1P54277 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PMS1P54277 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS1P54277 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS1P54277 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PMS1P54277 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PMS1P54277 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.27■■□□□ 1
PMS1P54277 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.27■■□□□ 1
PMS1P54277 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
PMS1P54277 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS1P54277 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS1P54277 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PMS1P54277 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.27■■□□□ 1
PMS1P54277 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.27■■□□□ 1
PMS1P54277 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.27■■□□□ 1
PMS1P54277 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PMS1P54277 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PMS1P54277 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.27■■□□□ 1
PMS1P54277 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.27■■□□□ 1
PMS1P54277 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.27■■□□□ 1
PMS1P54277 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
PMS1P54277 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PMS1P54277 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.26■□□□□ 0.99
PMS1P54277 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS1P54277 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS1P54277 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PMS1P54277 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS1P54277 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
PMS1P54277 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS1P54277 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.26■□□□□ 0.99
PMS1P54277 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PMS1P54277 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.26■□□□□ 0.99
PMS1P54277 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.26■□□□□ 0.99
PMS1P54277 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.26■□□□□ 0.99
PMS1P54277 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PMS1P54277 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.26■□□□□ 0.99
PMS1P54277 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS1P54277 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PMS1P54277 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PMS1P54277 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PMS1P54277 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.26■□□□□ 0.99
PMS1P54277 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PMS1P54277 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.26■□□□□ 0.99
PMS1P54277 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.25■□□□□ 0.99
PMS1P54277 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.25■□□□□ 0.99
PMS1P54277 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
PMS1P54277 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.25■□□□□ 0.99
PMS1P54277 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms