Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
NUBP1P53384 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NUBP1P53384 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 IL9RP2-201ENST00000423948 1312 ntBASIC19.26■□□□□ 0.67
NUBP1P53384 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC19.26■□□□□ 0.67
NUBP1P53384 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.26■□□□□ 0.67
NUBP1P53384 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.26■□□□□ 0.67
NUBP1P53384 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC19.26■□□□□ 0.67
NUBP1P53384 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 TSPY22P-201ENST00000427496 604 ntBASIC19.26■□□□□ 0.67
NUBP1P53384 KRT16P4-201ENST00000453883 522 ntBASIC19.26■□□□□ 0.67
NUBP1P53384 UPF3AP2-201ENST00000457924 1132 ntBASIC19.26■□□□□ 0.67
NUBP1P53384 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 AC104819.1-201ENST00000504587 486 ntBASIC19.26■□□□□ 0.67
NUBP1P53384 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.26■□□□□ 0.67
NUBP1P53384 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.26■□□□□ 0.67
NUBP1P53384 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.26■□□□□ 0.67
NUBP1P53384 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
NUBP1P53384 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.26■□□□□ 0.67
NUBP1P53384 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.26■□□□□ 0.67
NUBP1P53384 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.26■□□□□ 0.67
NUBP1P53384 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NUBP1P53384 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUBP1P53384 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUBP1P53384 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NUBP1P53384 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.25■□□□□ 0.67
NUBP1P53384 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.25■□□□□ 0.67
NUBP1P53384 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.25■□□□□ 0.67
NUBP1P53384 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.25■□□□□ 0.67
NUBP1P53384 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.25■□□□□ 0.67
NUBP1P53384 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NUBP1P53384 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NUBP1P53384 LINC02084-201ENST00000606069 1096 ntBASIC19.25■□□□□ 0.67
NUBP1P53384 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NUBP1P53384 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.25■□□□□ 0.67
NUBP1P53384 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.25■□□□□ 0.67
NUBP1P53384 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUBP1P53384 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NUBP1P53384 KRT8P41-201ENST00000533985 1514 ntBASIC19.25■□□□□ 0.67
NUBP1P53384 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NUBP1P53384 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NUBP1P53384 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.24■□□□□ 0.67
NUBP1P53384 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.24■□□□□ 0.67
NUBP1P53384 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.24■□□□□ 0.67
NUBP1P53384 MIR662-201ENST00000384847 95 ntBASIC19.24■□□□□ 0.67
NUBP1P53384 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.24■□□□□ 0.67
NUBP1P53384 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.24■□□□□ 0.67
NUBP1P53384 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NUBP1P53384 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.24■□□□□ 0.67
NUBP1P53384 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.24■□□□□ 0.67
NUBP1P53384 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.24■□□□□ 0.67
NUBP1P53384 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.24■□□□□ 0.67
NUBP1P53384 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NUBP1P53384 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.24■□□□□ 0.67
NUBP1P53384 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.24■□□□□ 0.67
NUBP1P53384 PMS2P7-201ENST00000506558 1336 ntBASIC19.24■□□□□ 0.67
NUBP1P53384 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.24■□□□□ 0.67
NUBP1P53384 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.24■□□□□ 0.67
NUBP1P53384 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NUBP1P53384 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NUBP1P53384 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUBP1P53384 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.23■□□□□ 0.67
NUBP1P53384 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.23■□□□□ 0.67
NUBP1P53384 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NUBP1P53384 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUBP1P53384 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NUBP1P53384 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUBP1P53384 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.23■□□□□ 0.67
NUBP1P53384 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC19.23■□□□□ 0.67
NUBP1P53384 HLA-F-220ENST00000434407 884 ntBASIC19.23■□□□□ 0.67
NUBP1P53384 HMGN1P19-201ENST00000436976 333 ntBASIC19.23■□□□□ 0.67
NUBP1P53384 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.23■□□□□ 0.67
NUBP1P53384 AC022494.1-201ENST00000466044 728 ntBASIC19.23■□□□□ 0.67
NUBP1P53384 TOB2P1-201ENST00000469761 992 ntBASIC19.23■□□□□ 0.67
NUBP1P53384 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.23■□□□□ 0.67
NUBP1P53384 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NUBP1P53384 AC079791.1-201ENST00000605356 973 ntBASIC19.23■□□□□ 0.67
NUBP1P53384 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.23■□□□□ 0.67
NUBP1P53384 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NUBP1P53384 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.23■□□□□ 0.67
NUBP1P53384 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms