Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
USP11P51784 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.91■■□□□ 1.1
USP11P51784 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP11P51784 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
USP11P51784 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.9■■□□□ 1.1
USP11P51784 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
USP11P51784 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.9■■□□□ 1.1
USP11P51784 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.9■■□□□ 1.1
USP11P51784 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.9■■□□□ 1.1
USP11P51784 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.9■■□□□ 1.1
USP11P51784 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
USP11P51784 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USP11P51784 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.9■■□□□ 1.1
USP11P51784 Z82202.1-201ENST00000623446 1880 ntBASIC21.9■■□□□ 1.1
USP11P51784 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
USP11P51784 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
USP11P51784 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
USP11P51784 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
USP11P51784 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
USP11P51784 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
USP11P51784 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USP11P51784 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
USP11P51784 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.89■■□□□ 1.09
USP11P51784 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.89■■□□□ 1.09
USP11P51784 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.89■■□□□ 1.09
USP11P51784 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
USP11P51784 SDHAP1-207ENST00000440850 2000 ntBASIC21.89■■□□□ 1.09
USP11P51784 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
USP11P51784 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.88■■□□□ 1.09
USP11P51784 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.88■■□□□ 1.09
USP11P51784 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.88■■□□□ 1.09
USP11P51784 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
USP11P51784 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
USP11P51784 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.88■■□□□ 1.09
USP11P51784 AC008040.2-201ENST00000461049 708 ntBASIC21.88■■□□□ 1.09
USP11P51784 AC091390.4-202ENST00000476426 537 ntBASIC21.88■■□□□ 1.09
USP11P51784 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.88■■□□□ 1.09
USP11P51784 AL355075.4-201ENST00000554988 638 ntBASIC21.88■■□□□ 1.09
USP11P51784 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.88■■□□□ 1.09
USP11P51784 AC011298.2-201ENST00000617989 482 ntBASIC21.88■■□□□ 1.09
USP11P51784 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
USP11P51784 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP11P51784 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
USP11P51784 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP11P51784 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.88■■□□□ 1.09
USP11P51784 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USP11P51784 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP11P51784 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.87■■□□□ 1.09
USP11P51784 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP11P51784 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.87■■□□□ 1.09
USP11P51784 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.87■■□□□ 1.09
USP11P51784 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP11P51784 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
USP11P51784 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.87■■□□□ 1.09
USP11P51784 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
USP11P51784 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.87■■□□□ 1.09
USP11P51784 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.87■■□□□ 1.09
USP11P51784 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
USP11P51784 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.87■■□□□ 1.09
USP11P51784 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP11P51784 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP11P51784 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
USP11P51784 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
USP11P51784 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP11P51784 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USP11P51784 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
USP11P51784 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
USP11P51784 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.86■■□□□ 1.09
USP11P51784 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP11P51784 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
USP11P51784 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.86■■□□□ 1.09
USP11P51784 RBM17P1-201ENST00000453646 1190 ntBASIC21.86■■□□□ 1.09
USP11P51784 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.86■■□□□ 1.09
USP11P51784 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.86■■□□□ 1.09
USP11P51784 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.86■■□□□ 1.09
USP11P51784 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.86■■□□□ 1.09
USP11P51784 AP000692.2-201ENST00000608391 879 ntBASIC21.86■■□□□ 1.09
USP11P51784 DGCR10-201ENST00000609839 495 ntBASIC21.86■■□□□ 1.09
USP11P51784 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP11P51784 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
USP11P51784 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
USP11P51784 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
USP11P51784 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP11P51784 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USP11P51784 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.85■■□□□ 1.09
USP11P51784 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP11P51784 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.85■■□□□ 1.09
USP11P51784 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.85■■□□□ 1.09
USP11P51784 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP11P51784 UNC93B2-201ENST00000285383 730 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms