Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1A1P48729 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CSNK1A1P48729 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.22■□□□□ 0.35
CSNK1A1P48729 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1A1P48729 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1A1P48729 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1A1P48729 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CSNK1A1P48729 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1A1P48729 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 KRT18P29-201ENST00000397031 1267 ntBASIC17.21■□□□□ 0.35
CSNK1A1P48729 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 C1QBPP2-201ENST00000528754 825 ntBASIC17.21■□□□□ 0.35
CSNK1A1P48729 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 AC124016.1-201ENST00000609552 612 ntBASIC17.21■□□□□ 0.35
CSNK1A1P48729 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.21■□□□□ 0.35
CSNK1A1P48729 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1A1P48729 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSNK1A1P48729 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.21■□□□□ 0.34
CSNK1A1P48729 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSNK1A1P48729 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.21■□□□□ 0.34
CSNK1A1P48729 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1A1P48729 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.2■□□□□ 0.34
CSNK1A1P48729 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CSNK1A1P48729 Z82202.1-201ENST00000623446 1880 ntBASIC17.2■□□□□ 0.34
CSNK1A1P48729 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1A1P48729 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.2■□□□□ 0.34
CSNK1A1P48729 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1A1P48729 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CSNK1A1P48729 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.2■□□□□ 0.34
CSNK1A1P48729 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1A1P48729 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.2■□□□□ 0.34
CSNK1A1P48729 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1A1P48729 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CSNK1A1P48729 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.2■□□□□ 0.34
CSNK1A1P48729 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.2■□□□□ 0.34
CSNK1A1P48729 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CSNK1A1P48729 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1A1P48729 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1A1P48729 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 KRT16P5-201ENST00000455284 522 ntBASIC17.19■□□□□ 0.34
CSNK1A1P48729 AC133681.1-201ENST00000465482 601 ntBASIC17.19■□□□□ 0.34
CSNK1A1P48729 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 AC110285.5-201ENST00000611501 352 ntBASIC17.19■□□□□ 0.34
CSNK1A1P48729 ITM2C-210ENST00000620962 501 ntBASIC17.19■□□□□ 0.34
CSNK1A1P48729 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1A1P48729 AC005332.7-201ENST00000614046 2005 ntBASIC17.19■□□□□ 0.34
CSNK1A1P48729 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CSNK1A1P48729 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms