Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.38■□□□□ 0.53
GABRA4P48169 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.38■□□□□ 0.53
GABRA4P48169 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.38■□□□□ 0.53
GABRA4P48169 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GABRA4P48169 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.38■□□□□ 0.53
GABRA4P48169 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABRA4P48169 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.38■□□□□ 0.53
GABRA4P48169 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GABRA4P48169 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABRA4P48169 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABRA4P48169 SLC25A24-204ENST00000569674 2357 ntBASIC18.38■□□□□ 0.53
GABRA4P48169 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.38■□□□□ 0.53
GABRA4P48169 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABRA4P48169 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
GABRA4P48169 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.38■□□□□ 0.53
GABRA4P48169 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.38■□□□□ 0.53
GABRA4P48169 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABRA4P48169 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABRA4P48169 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GABRA4P48169 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.37■□□□□ 0.53
GABRA4P48169 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABRA4P48169 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABRA4P48169 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABRA4P48169 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
GABRA4P48169 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
GABRA4P48169 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.37■□□□□ 0.53
GABRA4P48169 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.37■□□□□ 0.53
GABRA4P48169 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.37■□□□□ 0.53
GABRA4P48169 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.37■□□□□ 0.53
GABRA4P48169 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABRA4P48169 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GABRA4P48169 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABRA4P48169 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GABRA4P48169 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GABRA4P48169 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
GABRA4P48169 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GABRA4P48169 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GABRA4P48169 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.36■□□□□ 0.53
GABRA4P48169 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
GABRA4P48169 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 MFAP1P1-201ENST00000442257 1255 ntBASIC18.36■□□□□ 0.53
GABRA4P48169 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.36■□□□□ 0.53
GABRA4P48169 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.36■□□□□ 0.53
GABRA4P48169 LINC01568-207ENST00000641790 1380 ntBASIC18.36■□□□□ 0.53
GABRA4P48169 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GABRA4P48169 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GABRA4P48169 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GABRA4P48169 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.35■□□□□ 0.53
GABRA4P48169 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRA4P48169 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRA4P48169 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
GABRA4P48169 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRA4P48169 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRA4P48169 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRA4P48169 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRA4P48169 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GABRA4P48169 TSPY14P-201ENST00000303979 915 ntBASIC18.35■□□□□ 0.53
GABRA4P48169 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRA4P48169 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRA4P48169 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.35■□□□□ 0.53
GABRA4P48169 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.35■□□□□ 0.53
GABRA4P48169 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GABRA4P48169 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GABRA4P48169 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRA4P48169 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA4P48169 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRA4P48169 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA4P48169 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms