Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 VENTXP5-201ENST00000523979 775 ntBASIC20.26■□□□□ 0.83
MTHFRP42898 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.26■□□□□ 0.83
MTHFRP42898 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.26■□□□□ 0.83
MTHFRP42898 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.26■□□□□ 0.83
MTHFRP42898 CLEC4GP1-201ENST00000596555 870 ntBASIC20.26■□□□□ 0.83
MTHFRP42898 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFRP42898 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.26■□□□□ 0.83
MTHFRP42898 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.26■□□□□ 0.83
MTHFRP42898 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFRP42898 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MTHFRP42898 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MTHFRP42898 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFRP42898 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFRP42898 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFRP42898 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFRP42898 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.25■□□□□ 0.83
MTHFRP42898 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFRP42898 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.25■□□□□ 0.83
MTHFRP42898 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.25■□□□□ 0.83
MTHFRP42898 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.25■□□□□ 0.83
MTHFRP42898 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.25■□□□□ 0.83
MTHFRP42898 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.25■□□□□ 0.83
MTHFRP42898 AL136038.3-201ENST00000561909 1096 ntBASIC20.25■□□□□ 0.83
MTHFRP42898 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
MTHFRP42898 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.25■□□□□ 0.83
MTHFRP42898 AL691432.3-201ENST00000621860 400 ntBASIC20.25■□□□□ 0.83
MTHFRP42898 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFRP42898 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFRP42898 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFRP42898 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MTHFRP42898 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MTHFRP42898 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MTHFRP42898 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MTHFRP42898 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFRP42898 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFRP42898 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFRP42898 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.24■□□□□ 0.83
MTHFRP42898 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.24■□□□□ 0.83
MTHFRP42898 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MTHFRP42898 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFRP42898 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.24■□□□□ 0.83
MTHFRP42898 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.24■□□□□ 0.83
MTHFRP42898 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.24■□□□□ 0.83
MTHFRP42898 AP003041.3-201ENST00000527151 707 ntBASIC20.24■□□□□ 0.83
MTHFRP42898 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFRP42898 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MTHFRP42898 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFRP42898 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.24■□□□□ 0.83
MTHFRP42898 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.24■□□□□ 0.83
MTHFRP42898 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFRP42898 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFRP42898 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MTHFRP42898 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.23■□□□□ 0.83
MTHFRP42898 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MTHFRP42898 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.23■□□□□ 0.83
MTHFRP42898 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
MTHFRP42898 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 KRT18P38-201ENST00000449496 1282 ntBASIC20.23■□□□□ 0.83
MTHFRP42898 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.23■□□□□ 0.83
MTHFRP42898 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.23■□□□□ 0.83
MTHFRP42898 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.23■□□□□ 0.83
MTHFRP42898 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.23■□□□□ 0.83
MTHFRP42898 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 FEM1AP4-201ENST00000443167 1987 ntBASIC20.23■□□□□ 0.83
MTHFRP42898 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MTHFRP42898 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.22■□□□□ 0.83
MTHFRP42898 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
MTHFRP42898 AF106564.1-201ENST00000607058 2553 ntBASIC20.22■□□□□ 0.83
MTHFRP42898 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.22■□□□□ 0.83
MTHFRP42898 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MTHFRP42898 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms