Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
RORAP35398 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.39■□□□□ 0.54
RORAP35398 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RORAP35398 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RORAP35398 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RORAP35398 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.39■□□□□ 0.53
RORAP35398 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.39■□□□□ 0.53
RORAP35398 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.39■□□□□ 0.53
RORAP35398 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.39■□□□□ 0.53
RORAP35398 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 AP000692.2-201ENST00000608391 879 ntBASIC18.39■□□□□ 0.53
RORAP35398 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.39■□□□□ 0.53
RORAP35398 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.39■□□□□ 0.53
RORAP35398 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RORAP35398 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
RORAP35398 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.38■□□□□ 0.53
RORAP35398 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RORAP35398 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RORAP35398 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.38■□□□□ 0.53
RORAP35398 AC008040.2-201ENST00000461049 708 ntBASIC18.38■□□□□ 0.53
RORAP35398 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.38■□□□□ 0.53
RORAP35398 AC097488.1-201ENST00000507834 756 ntBASIC18.38■□□□□ 0.53
RORAP35398 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.38■□□□□ 0.53
RORAP35398 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 RN7SL850P-201ENST00000579959 291 ntBASIC18.38■□□□□ 0.53
RORAP35398 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 AC011298.2-201ENST00000617989 482 ntBASIC18.38■□□□□ 0.53
RORAP35398 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RORAP35398 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.38■□□□□ 0.53
RORAP35398 KRT18P22-201ENST00000402024 1347 ntBASIC18.38■□□□□ 0.53
RORAP35398 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.38■□□□□ 0.53
RORAP35398 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.38■□□□□ 0.53
RORAP35398 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RORAP35398 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.38■□□□□ 0.53
RORAP35398 AC112907.3-201ENST00000577781 2400 ntBASIC18.38■□□□□ 0.53
RORAP35398 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RORAP35398 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RORAP35398 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RORAP35398 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.37■□□□□ 0.53
RORAP35398 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RORAP35398 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RORAP35398 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RORAP35398 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RORAP35398 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RORAP35398 AC113347.1-201ENST00000413321 391 ntBASIC18.37■□□□□ 0.53
RORAP35398 AC004951.3-201ENST00000418645 1148 ntBASIC18.37■□□□□ 0.53
RORAP35398 TMPOP1-202ENST00000424642 1267 ntBASIC18.37■□□□□ 0.53
RORAP35398 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.37■□□□□ 0.53
RORAP35398 Z85996.1-201ENST00000494644 937 ntBASIC18.37■□□□□ 0.53
RORAP35398 AC092865.7-201ENST00000641832 219 ntBASIC18.37■□□□□ 0.53
RORAP35398 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RORAP35398 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RORAP35398 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RORAP35398 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RORAP35398 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.37■□□□□ 0.53
RORAP35398 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RORAP35398 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.37■□□□□ 0.53
RORAP35398 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RORAP35398 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.36■□□□□ 0.53
RORAP35398 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
RORAP35398 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RORAP35398 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.36■□□□□ 0.53
RORAP35398 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RORAP35398 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.36■□□□□ 0.53
RORAP35398 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RORAP35398 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RORAP35398 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RORAP35398 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.36■□□□□ 0.53
RORAP35398 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.36■□□□□ 0.53
RORAP35398 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.36■□□□□ 0.53
RORAP35398 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RORAP35398 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.36■□□□□ 0.53
RORAP35398 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RORAP35398 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.35■□□□□ 0.53
RORAP35398 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RORAP35398 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.35■□□□□ 0.53
RORAP35398 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RORAP35398 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RORAP35398 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms