Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP11P24347 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP11P24347 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.38■□□□□ 0.53
MMP11P24347 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MMP11P24347 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.38■□□□□ 0.53
MMP11P24347 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MMP11P24347 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MMP11P24347 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP11P24347 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP11P24347 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP11P24347 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MMP11P24347 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP11P24347 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.37■□□□□ 0.53
MMP11P24347 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MMP11P24347 RBM17P1-201ENST00000453646 1190 ntBASIC18.37■□□□□ 0.53
MMP11P24347 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP11P24347 AC116562.2-201ENST00000507042 360 ntBASIC18.37■□□□□ 0.53
MMP11P24347 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.37■□□□□ 0.53
MMP11P24347 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP11P24347 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP11P24347 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.37■□□□□ 0.53
MMP11P24347 AC097493.4-201ENST00000641197 219 ntBASIC18.37■□□□□ 0.53
MMP11P24347 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP11P24347 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MMP11P24347 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MMP11P24347 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP11P24347 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MMP11P24347 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.37■□□□□ 0.53
MMP11P24347 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.37■□□□□ 0.53
MMP11P24347 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP11P24347 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MMP11P24347 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.37■□□□□ 0.53
MMP11P24347 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MMP11P24347 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MMP11P24347 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP11P24347 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP11P24347 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP11P24347 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP11P24347 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP11P24347 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP11P24347 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP11P24347 FAM210CP-201ENST00000445714 574 ntBASIC18.36■□□□□ 0.53
MMP11P24347 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP11P24347 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.36■□□□□ 0.53
MMP11P24347 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
MMP11P24347 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP11P24347 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP11P24347 AC012306.2-201ENST00000609350 630 ntBASIC18.36■□□□□ 0.53
MMP11P24347 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MMP11P24347 AL445675.2-201ENST00000620291 557 ntBASIC18.36■□□□□ 0.53
MMP11P24347 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP11P24347 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MMP11P24347 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MMP11P24347 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP11P24347 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP11P24347 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP11P24347 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP11P24347 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.35■□□□□ 0.53
MMP11P24347 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.35■□□□□ 0.53
MMP11P24347 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MMP11P24347 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP11P24347 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP11P24347 AL031985.4-201ENST00000642138 673 ntBASIC18.35■□□□□ 0.53
MMP11P24347 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP11P24347 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP11P24347 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP11P24347 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP11P24347 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP11P24347 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP11P24347 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.34■□□□□ 0.53
MMP11P24347 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.34■□□□□ 0.53
MMP11P24347 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP11P24347 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.34■□□□□ 0.53
MMP11P24347 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MMP11P24347 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP11P24347 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP11P24347 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MMP11P24347 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms