Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.53■□□□□ 0.72
XPAP23025 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.53■□□□□ 0.72
XPAP23025 HLA-A-209ENST00000638375 975 ntBASIC19.53■□□□□ 0.72
XPAP23025 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
XPAP23025 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
XPAP23025 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XPAP23025 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.52■□□□□ 0.72
XPAP23025 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.52■□□□□ 0.72
XPAP23025 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.52■□□□□ 0.72
XPAP23025 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
XPAP23025 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.52■□□□□ 0.72
XPAP23025 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.52■□□□□ 0.72
XPAP23025 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
XPAP23025 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
XPAP23025 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
XPAP23025 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
XPAP23025 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.51■□□□□ 0.71
XPAP23025 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
XPAP23025 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.51■□□□□ 0.71
XPAP23025 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.51■□□□□ 0.71
XPAP23025 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.51■□□□□ 0.71
XPAP23025 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.51■□□□□ 0.71
XPAP23025 AL355075.4-201ENST00000554988 638 ntBASIC19.51■□□□□ 0.71
XPAP23025 AC026271.3-201ENST00000571884 352 ntBASIC19.51■□□□□ 0.71
XPAP23025 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.51■□□□□ 0.71
XPAP23025 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
XPAP23025 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
XPAP23025 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
XPAP23025 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
XPAP23025 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.51■□□□□ 0.71
XPAP23025 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
XPAP23025 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.51■□□□□ 0.71
XPAP23025 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
XPAP23025 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
XPAP23025 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.5■□□□□ 0.71
XPAP23025 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.5■□□□□ 0.71
XPAP23025 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.5■□□□□ 0.71
XPAP23025 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
XPAP23025 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.5■□□□□ 0.71
XPAP23025 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.5■□□□□ 0.71
XPAP23025 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
XPAP23025 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
XPAP23025 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.5■□□□□ 0.71
XPAP23025 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.5■□□□□ 0.71
XPAP23025 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XPAP23025 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
XPAP23025 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XPAP23025 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.49■□□□□ 0.71
XPAP23025 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XPAP23025 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XPAP23025 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
XPAP23025 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.49■□□□□ 0.71
XPAP23025 FSCN1P1-201ENST00000568912 1481 ntBASIC19.49■□□□□ 0.71
XPAP23025 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XPAP23025 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XPAP23025 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XPAP23025 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XPAP23025 UNC93B2-201ENST00000285383 730 ntBASIC19.49■□□□□ 0.71
XPAP23025 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
XPAP23025 AC004980.1-204ENST00000429707 299 ntBASIC19.49■□□□□ 0.71
XPAP23025 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
XPAP23025 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.49■□□□□ 0.71
XPAP23025 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.49■□□□□ 0.71
XPAP23025 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.49■□□□□ 0.71
XPAP23025 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XPAP23025 REXO1L10P-201ENST00000615707 1290 ntBASIC19.49■□□□□ 0.71
XPAP23025 REXO1L12P-201ENST00000622156 912 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms