Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.69■□□□□ 0.42
BMP4P12644 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
BMP4P12644 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.69■□□□□ 0.42
BMP4P12644 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.69■□□□□ 0.42
BMP4P12644 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.69■□□□□ 0.42
BMP4P12644 AC091799.1-201ENST00000422823 811 ntBASIC17.69■□□□□ 0.42
BMP4P12644 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.69■□□□□ 0.42
BMP4P12644 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.69■□□□□ 0.42
BMP4P12644 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.69■□□□□ 0.42
BMP4P12644 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.69■□□□□ 0.42
BMP4P12644 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.69■□□□□ 0.42
BMP4P12644 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.69■□□□□ 0.42
BMP4P12644 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.69■□□□□ 0.42
BMP4P12644 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BMP4P12644 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
BMP4P12644 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
BMP4P12644 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.68■□□□□ 0.42
BMP4P12644 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.68■□□□□ 0.42
BMP4P12644 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.68■□□□□ 0.42
BMP4P12644 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
BMP4P12644 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.68■□□□□ 0.42
BMP4P12644 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
BMP4P12644 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BMP4P12644 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.68■□□□□ 0.42
BMP4P12644 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
BMP4P12644 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.68■□□□□ 0.42
BMP4P12644 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
BMP4P12644 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.68■□□□□ 0.42
BMP4P12644 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.68■□□□□ 0.42
BMP4P12644 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.68■□□□□ 0.42
BMP4P12644 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.68■□□□□ 0.42
BMP4P12644 AL589743.5-201ENST00000616611 1050 ntBASIC17.68■□□□□ 0.42
BMP4P12644 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.68■□□□□ 0.42
BMP4P12644 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.68■□□□□ 0.42
BMP4P12644 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BMP4P12644 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
BMP4P12644 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.67■□□□□ 0.42
BMP4P12644 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
BMP4P12644 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BMP4P12644 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
BMP4P12644 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.67■□□□□ 0.42
BMP4P12644 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BMP4P12644 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BMP4P12644 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BMP4P12644 AC007322.3-201ENST00000426526 701 ntBASIC17.67■□□□□ 0.42
BMP4P12644 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.67■□□□□ 0.42
BMP4P12644 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.67■□□□□ 0.42
BMP4P12644 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BMP4P12644 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
BMP4P12644 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.67■□□□□ 0.42
BMP4P12644 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BMP4P12644 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.67■□□□□ 0.42
BMP4P12644 AC068880.1-201ENST00000507289 2297 ntBASIC17.67■□□□□ 0.42
BMP4P12644 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BMP4P12644 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
BMP4P12644 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BMP4P12644 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.66■□□□□ 0.42
BMP4P12644 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.66■□□□□ 0.42
BMP4P12644 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 MCRIP2P1-201ENST00000394346 511 ntBASIC17.66■□□□□ 0.42
BMP4P12644 KRT18P29-201ENST00000397031 1267 ntBASIC17.66■□□□□ 0.42
BMP4P12644 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 DUSP5P2-201ENST00000426873 1033 ntBASIC17.66■□□□□ 0.42
BMP4P12644 POU5F1P3-201ENST00000428824 1078 ntBASIC17.66■□□□□ 0.42
BMP4P12644 AC091874.3-201ENST00000512672 1195 ntBASIC17.66■□□□□ 0.42
BMP4P12644 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms