Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LAMP1P11279 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LAMP1P11279 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMP1P11279 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LAMP1P11279 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LAMP1P11279 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.33■□□□□ 0.52
LAMP1P11279 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.33■□□□□ 0.52
LAMP1P11279 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.33■□□□□ 0.52
LAMP1P11279 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.33■□□□□ 0.52
LAMP1P11279 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.33■□□□□ 0.52
LAMP1P11279 AC008687.6-201ENST00000596318 630 ntBASIC18.33■□□□□ 0.52
LAMP1P11279 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.33■□□□□ 0.52
LAMP1P11279 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.33■□□□□ 0.52
LAMP1P11279 AL121829.2-201ENST00000620908 328 ntBASIC18.33■□□□□ 0.52
LAMP1P11279 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.33■□□□□ 0.52
LAMP1P11279 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.33■□□□□ 0.52
LAMP1P11279 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMP1P11279 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LAMP1P11279 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LAMP1P11279 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LAMP1P11279 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.32■□□□□ 0.52
LAMP1P11279 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.32■□□□□ 0.52
LAMP1P11279 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.32■□□□□ 0.52
LAMP1P11279 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LAMP1P11279 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LAMP1P11279 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.32■□□□□ 0.52
LAMP1P11279 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
LAMP1P11279 KRT18P16-201ENST00000510337 1294 ntBASIC18.32■□□□□ 0.52
LAMP1P11279 AC090192.1-201ENST00000517740 490 ntBASIC18.32■□□□□ 0.52
LAMP1P11279 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.32■□□□□ 0.52
LAMP1P11279 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.32■□□□□ 0.52
LAMP1P11279 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.32■□□□□ 0.52
LAMP1P11279 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
LAMP1P11279 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LAMP1P11279 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LAMP1P11279 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LAMP1P11279 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LAMP1P11279 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LAMP1P11279 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LAMP1P11279 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LAMP1P11279 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LAMP1P11279 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.31■□□□□ 0.52
LAMP1P11279 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.31■□□□□ 0.52
LAMP1P11279 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.31■□□□□ 0.52
LAMP1P11279 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.31■□□□□ 0.52
LAMP1P11279 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LAMP1P11279 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.31■□□□□ 0.52
LAMP1P11279 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
LAMP1P11279 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.31■□□□□ 0.52
LAMP1P11279 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LAMP1P11279 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMP1P11279 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMP1P11279 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMP1P11279 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMP1P11279 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.3■□□□□ 0.52
LAMP1P11279 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LAMP1P11279 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LAMP1P11279 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.3■□□□□ 0.52
LAMP1P11279 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMP1P11279 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LAMP1P11279 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMP1P11279 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.3■□□□□ 0.52
LAMP1P11279 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LAMP1P11279 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.3■□□□□ 0.52
LAMP1P11279 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
LAMP1P11279 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.3■□□□□ 0.52
LAMP1P11279 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LAMP1P11279 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LAMP1P11279 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms