Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 KRT8P9-201ENST00000558927 1449 ntBASIC21.81■■□□□ 1.08
CYP3A4P08684 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.81■■□□□ 1.08
CYP3A4P08684 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CYP3A4P08684 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CYP3A4P08684 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.81■■□□□ 1.08
CYP3A4P08684 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CYP3A4P08684 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CYP3A4P08684 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CYP3A4P08684 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CYP3A4P08684 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.81■■□□□ 1.08
CYP3A4P08684 AL390955.1-201ENST00000428694 934 ntBASIC21.81■■□□□ 1.08
CYP3A4P08684 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.81■■□□□ 1.08
CYP3A4P08684 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.81■■□□□ 1.08
CYP3A4P08684 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.81■■□□□ 1.08
CYP3A4P08684 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.81■■□□□ 1.08
CYP3A4P08684 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.81■■□□□ 1.08
CYP3A4P08684 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CYP3A4P08684 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CYP3A4P08684 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.8■■□□□ 1.08
CYP3A4P08684 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.8■■□□□ 1.08
CYP3A4P08684 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.8■■□□□ 1.08
CYP3A4P08684 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CYP3A4P08684 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.8■■□□□ 1.08
CYP3A4P08684 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.8■■□□□ 1.08
CYP3A4P08684 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CYP3A4P08684 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CYP3A4P08684 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
CYP3A4P08684 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CYP3A4P08684 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.79■■□□□ 1.08
CYP3A4P08684 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CYP3A4P08684 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.79■■□□□ 1.08
CYP3A4P08684 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.79■■□□□ 1.08
CYP3A4P08684 SLC25A1P4-201ENST00000567977 778 ntBASIC21.79■■□□□ 1.08
CYP3A4P08684 AC012306.2-201ENST00000609350 630 ntBASIC21.79■■□□□ 1.08
CYP3A4P08684 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.79■■□□□ 1.08
CYP3A4P08684 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.79■■□□□ 1.08
CYP3A4P08684 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.79■■□□□ 1.08
CYP3A4P08684 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.79■■□□□ 1.08
CYP3A4P08684 KRT8P11-201ENST00000409686 1436 ntBASIC21.79■■□□□ 1.08
CYP3A4P08684 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CYP3A4P08684 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.78■■□□□ 1.08
CYP3A4P08684 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.78■■□□□ 1.08
CYP3A4P08684 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
CYP3A4P08684 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CYP3A4P08684 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.78■■□□□ 1.08
CYP3A4P08684 AC211429.1-201ENST00000415277 523 ntBASIC21.78■■□□□ 1.08
CYP3A4P08684 CRYGFP-201ENST00000418459 633 ntBASIC21.78■■□□□ 1.08
CYP3A4P08684 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.78■■□□□ 1.08
CYP3A4P08684 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 CKBP1-201ENST00000565489 1086 ntBASIC21.78■■□□□ 1.08
CYP3A4P08684 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.78■■□□□ 1.08
CYP3A4P08684 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
CYP3A4P08684 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.78■■□□□ 1.08
CYP3A4P08684 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CYP3A4P08684 CYP2D8P-201ENST00000433633 1490 ntBASIC21.77■■□□□ 1.08
CYP3A4P08684 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CYP3A4P08684 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP3A4P08684 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP3A4P08684 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP3A4P08684 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP3A4P08684 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP3A4P08684 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CYP3A4P08684 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP3A4P08684 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
CYP3A4P08684 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP3A4P08684 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.77■■□□□ 1.08
CYP3A4P08684 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
CYP3A4P08684 MFAP1P1-201ENST00000442257 1255 ntBASIC21.77■■□□□ 1.08
CYP3A4P08684 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CYP3A4P08684 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.77■■□□□ 1.08
CYP3A4P08684 PRSS44-201ENST00000515154 1146 ntBASIC21.77■■□□□ 1.08
CYP3A4P08684 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms