Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.32■□□□□ 0.04
IFNA1P01562 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
IFNA1P01562 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNA1P01562 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
IFNA1P01562 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.32■□□□□ 0.04
IFNA1P01562 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
IFNA1P01562 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
IFNA1P01562 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.32■□□□□ 0.04
IFNA1P01562 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.32■□□□□ 0.04
IFNA1P01562 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.32■□□□□ 0.04
IFNA1P01562 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
IFNA1P01562 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.32■□□□□ 0.04
IFNA1P01562 AC093525.10-201ENST00000625130 1569 ntBASIC15.32■□□□□ 0.04
IFNA1P01562 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
IFNA1P01562 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFNA1P01562 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.31■□□□□ 0.04
IFNA1P01562 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
IFNA1P01562 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
IFNA1P01562 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 KRT16P6-202ENST00000425692 1426 ntBASIC15.31■□□□□ 0.04
IFNA1P01562 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.31■□□□□ 0.04
IFNA1P01562 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNA1P01562 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNA1P01562 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.3■□□□□ 0.04
IFNA1P01562 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
IFNA1P01562 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IFNA1P01562 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.3■□□□□ 0.04
IFNA1P01562 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IFNA1P01562 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.3■□□□□ 0.04
IFNA1P01562 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.3■□□□□ 0.04
IFNA1P01562 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.3■□□□□ 0.04
IFNA1P01562 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.3■□□□□ 0.04
IFNA1P01562 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 AC133561.4-201ENST00000566112 224 ntBASIC15.3■□□□□ 0.04
IFNA1P01562 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.3■□□□□ 0.04
IFNA1P01562 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.3■□□□□ 0.04
IFNA1P01562 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
IFNA1P01562 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.3■□□□□ 0.04
IFNA1P01562 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IFNA1P01562 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
IFNA1P01562 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
IFNA1P01562 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms