Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC30.24■■■□□ 2.43
PCF11O94913 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC30.24■■■□□ 2.43
PCF11O94913 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
PCF11O94913 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC30.23■■■□□ 2.43
PCF11O94913 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC30.23■■■□□ 2.43
PCF11O94913 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC30.23■■■□□ 2.43
PCF11O94913 AL031133.1-201ENST00000406807 723 ntBASIC30.23■■■□□ 2.43
PCF11O94913 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC30.23■■■□□ 2.43
PCF11O94913 COX11P1-201ENST00000489116 835 ntBASIC30.23■■■□□ 2.43
PCF11O94913 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC30.23■■■□□ 2.43
PCF11O94913 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC30.23■■■□□ 2.43
PCF11O94913 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC30.23■■■□□ 2.43
PCF11O94913 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCF11O94913 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PCF11O94913 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCF11O94913 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PCF11O94913 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC30.22■■■□□ 2.43
PCF11O94913 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC30.22■■■□□ 2.43
PCF11O94913 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC30.22■■■□□ 2.43
PCF11O94913 NT5C-210ENST00000582160 860 ntTSL 2 BASIC30.22■■■□□ 2.43
PCF11O94913 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC30.22■■■□□ 2.43
PCF11O94913 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC30.22■■■□□ 2.43
PCF11O94913 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PCF11O94913 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCF11O94913 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC30.22■■■□□ 2.43
PCF11O94913 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PCF11O94913 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PCF11O94913 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC30.21■■■□□ 2.43
PCF11O94913 BX664615.1-201ENST00000443558 458 ntBASIC30.21■■■□□ 2.43
PCF11O94913 KRT18P38-201ENST00000449496 1282 ntBASIC30.21■■■□□ 2.43
PCF11O94913 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
PCF11O94913 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
PCF11O94913 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
PCF11O94913 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCF11O94913 COPE-203ENST00000351079 907 ntTSL 2 BASIC30.2■■■□□ 2.43
PCF11O94913 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCF11O94913 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC30.2■■■□□ 2.43
PCF11O94913 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCF11O94913 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PCF11O94913 LINC01006-201ENST00000333319 2292 ntBASIC30.2■■■□□ 2.43
PCF11O94913 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCF11O94913 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCF11O94913 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
PCF11O94913 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
PCF11O94913 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
PCF11O94913 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
PCF11O94913 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC30.2■■■□□ 2.42
PCF11O94913 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC30.2■■■□□ 2.42
PCF11O94913 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC30.19■■■□□ 2.42
PCF11O94913 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC30.19■■■□□ 2.42
PCF11O94913 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC30.19■■■□□ 2.42
PCF11O94913 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC30.19■■■□□ 2.42
PCF11O94913 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC30.19■■■□□ 2.42
PCF11O94913 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC30.19■■■□□ 2.42
PCF11O94913 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCF11O94913 IPPK-202ENST00000375522 882 ntTSL 3 BASIC30.19■■■□□ 2.42
PCF11O94913 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCF11O94913 RNF152P1-201ENST00000397754 604 ntBASIC30.19■■■□□ 2.42
PCF11O94913 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC30.19■■■□□ 2.42
PCF11O94913 PP7080-204ENST00000510714 601 ntTSL 3 BASIC30.19■■■□□ 2.42
PCF11O94913 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC30.19■■■□□ 2.42
PCF11O94913 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC30.19■■■□□ 2.42
PCF11O94913 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCF11O94913 LBX2-AS1-202ENST00000603175 2083 ntBASIC30.18■■■□□ 2.42
PCF11O94913 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC30.18■■■□□ 2.42
PCF11O94913 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC30.18■■■□□ 2.42
PCF11O94913 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC30.18■■■□□ 2.42
PCF11O94913 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC30.18■■■□□ 2.42
PCF11O94913 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PCF11O94913 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PCF11O94913 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
PCF11O94913 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
PCF11O94913 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
PCF11O94913 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
PCF11O94913 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCF11O94913 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC30.17■■■□□ 2.42
PCF11O94913 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCF11O94913 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC30.17■■■□□ 2.42
PCF11O94913 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC30.17■■■□□ 2.42
PCF11O94913 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
PCF11O94913 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PCF11O94913 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCF11O94913 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCF11O94913 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCF11O94913 SDHAP1-207ENST00000440850 2000 ntBASIC30.17■■■□□ 2.42
PCF11O94913 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCF11O94913 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC30.17■■■□□ 2.42
PCF11O94913 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC30.17■■■□□ 2.42
PCF11O94913 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms