Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
USP1O94782 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.56■□□□□ 0.72
USP1O94782 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.56■□□□□ 0.72
USP1O94782 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
USP1O94782 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP1O94782 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
USP1O94782 YBX1P10-201ENST00000444752 975 ntBASIC19.56■□□□□ 0.72
USP1O94782 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.56■□□□□ 0.72
USP1O94782 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.56■□□□□ 0.72
USP1O94782 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 AC133041.1-202ENST00000642053 222 ntBASIC19.56■□□□□ 0.72
USP1O94782 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.56■□□□□ 0.72
USP1O94782 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.56■□□□□ 0.72
USP1O94782 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP1O94782 AP006587.1-201ENST00000534129 1502 ntBASIC19.56■□□□□ 0.72
USP1O94782 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.56■□□□□ 0.72
USP1O94782 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
USP1O94782 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
USP1O94782 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
USP1O94782 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
USP1O94782 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 AC069152.1-201ENST00000438030 544 ntBASIC19.55■□□□□ 0.72
USP1O94782 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.55■□□□□ 0.72
USP1O94782 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.55■□□□□ 0.72
USP1O94782 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.55■□□□□ 0.72
USP1O94782 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
USP1O94782 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.55■□□□□ 0.72
USP1O94782 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
USP1O94782 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP1O94782 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.54■□□□□ 0.72
USP1O94782 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
USP1O94782 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
USP1O94782 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
USP1O94782 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.54■□□□□ 0.72
USP1O94782 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.54■□□□□ 0.72
USP1O94782 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.54■□□□□ 0.72
USP1O94782 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.54■□□□□ 0.72
USP1O94782 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.54■□□□□ 0.72
USP1O94782 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.54■□□□□ 0.72
USP1O94782 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.54■□□□□ 0.72
USP1O94782 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
USP1O94782 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP1O94782 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 AC141586.3-201ENST00000562166 1838 ntBASIC19.53■□□□□ 0.72
USP1O94782 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.53■□□□□ 0.72
USP1O94782 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.53■□□□□ 0.72
USP1O94782 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.53■□□□□ 0.72
USP1O94782 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.53■□□□□ 0.72
USP1O94782 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.53■□□□□ 0.72
USP1O94782 AC120498.8-201ENST00000614275 531 ntBASIC19.53■□□□□ 0.72
USP1O94782 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
USP1O94782 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.53■□□□□ 0.72
USP1O94782 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP1O94782 TEX21P-204ENST00000641479 1693 ntBASIC19.52■□□□□ 0.72
USP1O94782 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP1O94782 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP1O94782 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP1O94782 KRT8P8-201ENST00000434750 1448 ntBASIC19.52■□□□□ 0.72
USP1O94782 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms