Protein–RNA interactions for Protein: O76064

RNF8, E3 ubiquitin-protein ligase RNF8, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8O76064 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RNF8O76064 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF8O76064 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF8O76064 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF8O76064 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF8O76064 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF8O76064 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF8O76064 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF8O76064 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.33■□□□□ 0.85
RNF8O76064 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF8O76064 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF8O76064 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF8O76064 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF8O76064 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF8O76064 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF8O76064 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF8O76064 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF8O76064 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF8O76064 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RNF8O76064 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF8O76064 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF8O76064 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF8O76064 ZNF815P-204ENST00000434898 1737 ntBASIC20.33■□□□□ 0.84
RNF8O76064 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 AC138932.1-201ENST00000534164 6830 ntBASIC20.32■□□□□ 0.84
RNF8O76064 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF8O76064 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF8O76064 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF8O76064 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
RNF8O76064 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF8O76064 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF8O76064 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF8O76064 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF8O76064 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF8O76064 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
RNF8O76064 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
RNF8O76064 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF8O76064 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF8O76064 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RNF8O76064 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF8O76064 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF8O76064 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF8O76064 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
RNF8O76064 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF8O76064 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF8O76064 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF8O76064 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF8O76064 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
RNF8O76064 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF8O76064 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 AC069544.1-201ENST00000609399 999 ntBASIC20.31■□□□□ 0.84
RNF8O76064 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.31■□□□□ 0.84
RNF8O76064 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF8O76064 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF8O76064 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF8O76064 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RNF8O76064 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF8O76064 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF8O76064 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF8O76064 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF8O76064 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF8O76064 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF8O76064 ESRRAP1-201ENST00000400596 1257 ntBASIC20.3■□□□□ 0.84
RNF8O76064 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF8O76064 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF8O76064 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF8O76064 NBPF21P-201ENST00000425093 1451 ntBASIC20.3■□□□□ 0.84
RNF8O76064 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms